Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.37■□□□□ 0.05
CPNE3O75131 AL139010.1-201ENST00000454878 894 ntBASIC15.37■□□□□ 0.05
CPNE3O75131 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.37■□□□□ 0.05
CPNE3O75131 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE3O75131 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.37■□□□□ 0.05
CPNE3O75131 AL365330.1-201ENST00000607459 531 ntBASIC15.37■□□□□ 0.05
CPNE3O75131 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE3O75131 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CPNE3O75131 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CPNE3O75131 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CPNE3O75131 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CPNE3O75131 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 AC063926.2-201ENST00000623766 1308 ntBASIC15.37■□□□□ 0.05
CPNE3O75131 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CPNE3O75131 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE3O75131 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE3O75131 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CPNE3O75131 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.36■□□□□ 0.05
CPNE3O75131 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CPNE3O75131 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.36■□□□□ 0.05
CPNE3O75131 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.36■□□□□ 0.05
CPNE3O75131 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.36■□□□□ 0.05
CPNE3O75131 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 AC135586.1-201ENST00000539323 574 ntBASIC15.36■□□□□ 0.05
CPNE3O75131 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 SPDYE22P-201ENST00000582158 798 ntBASIC15.36■□□□□ 0.05
CPNE3O75131 AL662799.1-202ENST00000614205 422 ntBASIC15.36■□□□□ 0.05
CPNE3O75131 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 AC005622.1-201ENST00000636801 1703 ntBASIC15.36■□□□□ 0.05
CPNE3O75131 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CPNE3O75131 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CPNE3O75131 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE3O75131 KRT8P12-202ENST00000472924 1397 ntBASIC15.36■□□□□ 0.05
CPNE3O75131 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE3O75131 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.35■□□□□ 0.05
CPNE3O75131 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.35■□□□□ 0.05
CPNE3O75131 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 AC078925.2-201ENST00000624013 1973 ntBASIC15.35■□□□□ 0.05
CPNE3O75131 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CPNE3O75131 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.35■□□□□ 0.05
CPNE3O75131 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.35■□□□□ 0.05
CPNE3O75131 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
CPNE3O75131 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 SPDYE17-201ENST00000412399 783 ntBASIC15.35■□□□□ 0.05
CPNE3O75131 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms