Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC105250.1-201ENST00000509378 2057 ntBASIC19.63■□□□□ 0.73
SMARCA5O60264 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCA5O60264 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SMARCA5O60264 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCA5O60264 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SMARCA5O60264 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SMARCA5O60264 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCA5O60264 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCA5O60264 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMARCA5O60264 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMARCA5O60264 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMARCA5O60264 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCA5O60264 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.62■□□□□ 0.73
SMARCA5O60264 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCA5O60264 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCA5O60264 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 AC097493.3-201ENST00000509725 367 ntBASIC19.62■□□□□ 0.73
SMARCA5O60264 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCA5O60264 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCA5O60264 AL512361.1-201ENST00000554200 418 ntBASIC19.62■□□□□ 0.73
SMARCA5O60264 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.62■□□□□ 0.73
SMARCA5O60264 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.62■□□□□ 0.73
SMARCA5O60264 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMARCA5O60264 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCA5O60264 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCA5O60264 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCA5O60264 SSR4P1-203ENST00000599569 2260 ntBASIC19.62■□□□□ 0.73
SMARCA5O60264 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SMARCA5O60264 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMARCA5O60264 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
SMARCA5O60264 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SMARCA5O60264 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
SMARCA5O60264 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCA5O60264 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMARCA5O60264 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.61■□□□□ 0.73
SMARCA5O60264 AC107890.1-201ENST00000422478 521 ntBASIC19.61■□□□□ 0.73
SMARCA5O60264 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCA5O60264 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.61■□□□□ 0.73
SMARCA5O60264 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMARCA5O60264 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.61■□□□□ 0.73
SMARCA5O60264 AC015911.4-201ENST00000588022 1070 ntBASIC19.61■□□□□ 0.73
SMARCA5O60264 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMARCA5O60264 AC093512.1-201ENST00000617969 520 ntBASIC19.61■□□□□ 0.73
SMARCA5O60264 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCA5O60264 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCA5O60264 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 AC090616.6-203ENST00000579186 1945 ntBASIC19.61■□□□□ 0.73
SMARCA5O60264 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCA5O60264 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCA5O60264 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.6■□□□□ 0.73
SMARCA5O60264 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SMARCA5O60264 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.6■□□□□ 0.73
SMARCA5O60264 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SMARCA5O60264 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.6■□□□□ 0.73
SMARCA5O60264 AC074338.1-201ENST00000416825 156 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.6■□□□□ 0.73
SMARCA5O60264 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.6■□□□□ 0.73
SMARCA5O60264 TARDBPP1-201ENST00000442013 1203 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 FAM86GP-201ENST00000448322 971 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 AC069120.2-201ENST00000524091 540 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms