Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 BTBD7P1-201ENST00000447253 1453 ntBASIC17.9■□□□□ 0.46
CHMP2AO43633 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP2AO43633 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHMP2AO43633 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHMP2AO43633 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.9■□□□□ 0.46
CHMP2AO43633 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 AL589987.1-201ENST00000453380 819 ntBASIC17.9■□□□□ 0.46
CHMP2AO43633 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.9■□□□□ 0.46
CHMP2AO43633 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP2AO43633 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP2AO43633 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP2AO43633 AL513523.2-202ENST00000427283 2040 ntBASIC17.89■□□□□ 0.46
CHMP2AO43633 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP2AO43633 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP2AO43633 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHMP2AO43633 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CHMP2AO43633 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHMP2AO43633 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 AC114501.2-201ENST00000439631 535 ntBASIC17.89■□□□□ 0.45
CHMP2AO43633 SPTLC1P1-201ENST00000447199 261 ntBASIC17.89■□□□□ 0.45
CHMP2AO43633 PHKG1P2-201ENST00000457537 863 ntBASIC17.89■□□□□ 0.45
CHMP2AO43633 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP2AO43633 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP2AO43633 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP2AO43633 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.89■□□□□ 0.45
CHMP2AO43633 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP2AO43633 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.89■□□□□ 0.45
CHMP2AO43633 LINC01115-203ENST00000606068 577 ntBASIC17.89■□□□□ 0.45
CHMP2AO43633 AC074044.1-201ENST00000609673 707 ntBASIC17.89■□□□□ 0.45
CHMP2AO43633 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP2AO43633 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP2AO43633 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 AC026691.1-201ENST00000602502 2017 ntBASIC17.89■□□□□ 0.45
CHMP2AO43633 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CHMP2AO43633 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP2AO43633 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP2AO43633 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2AO43633 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2AO43633 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP2AO43633 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2AO43633 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHMP2AO43633 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP2AO43633 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 SPDYE19P-201ENST00000338590 713 ntBASIC17.88■□□□□ 0.45
CHMP2AO43633 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2AO43633 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMP2AO43633 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2AO43633 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP2AO43633 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMP2AO43633 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 AC112504.1-201ENST00000623415 1841 ntBASIC17.88■□□□□ 0.45
CHMP2AO43633 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP2AO43633 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 AC011477.6-201ENST00000604980 1927 ntBASIC17.88■□□□□ 0.45
CHMP2AO43633 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2AO43633 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms