Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 AL109954.1-202ENST00000564051 2148 ntBASIC15.89■□□□□ 0.13
PHGDHO43175 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PHGDHO43175 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PHGDHO43175 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PHGDHO43175 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 AC006486.2-201ENST00000624246 2199 ntBASIC15.89■□□□□ 0.13
PHGDHO43175 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PHGDHO43175 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PHGDHO43175 AC142381.1-201ENST00000426099 345 ntBASIC15.89■□□□□ 0.13
PHGDHO43175 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.89■□□□□ 0.13
PHGDHO43175 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.89■□□□□ 0.13
PHGDHO43175 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.89■□□□□ 0.13
PHGDHO43175 AC024267.1-201ENST00000582320 895 ntBASIC15.89■□□□□ 0.13
PHGDHO43175 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.89■□□□□ 0.13
PHGDHO43175 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PHGDHO43175 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.89■□□□□ 0.13
PHGDHO43175 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
PHGDHO43175 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.89■□□□□ 0.13
PHGDHO43175 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PHGDHO43175 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.89■□□□□ 0.13
PHGDHO43175 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.89■□□□□ 0.13
PHGDHO43175 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.88■□□□□ 0.13
PHGDHO43175 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.88■□□□□ 0.13
PHGDHO43175 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PHGDHO43175 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
PHGDHO43175 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.88■□□□□ 0.13
PHGDHO43175 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.88■□□□□ 0.13
PHGDHO43175 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.88■□□□□ 0.13
PHGDHO43175 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
PHGDHO43175 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.88■□□□□ 0.13
PHGDHO43175 AC243562.2-201ENST00000561247 970 ntBASIC15.88■□□□□ 0.13
PHGDHO43175 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.88■□□□□ 0.13
PHGDHO43175 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.88■□□□□ 0.13
PHGDHO43175 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.88■□□□□ 0.13
PHGDHO43175 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.88■□□□□ 0.13
PHGDHO43175 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.88■□□□□ 0.13
PHGDHO43175 AC008267.7-201ENST00000624570 1194 ntBASIC15.88■□□□□ 0.13
PHGDHO43175 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
PHGDHO43175 AC092902.6-201ENST00000641783 218 ntBASIC15.88■□□□□ 0.13
PHGDHO43175 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.88■□□□□ 0.13
PHGDHO43175 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.88■□□□□ 0.13
PHGDHO43175 LINC02228-204ENST00000642115 2962 ntBASIC15.88■□□□□ 0.13
PHGDHO43175 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.88■□□□□ 0.13
PHGDHO43175 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHGDHO43175 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.88■□□□□ 0.13
PHGDHO43175 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.88■□□□□ 0.13
PHGDHO43175 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PHGDHO43175 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms