Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 AC021723.1-201ENST00000486306 515 ntBASIC16.69■□□□□ 0.26
SOX1O00570 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.69■□□□□ 0.26
SOX1O00570 AP002803.1-201ENST00000528836 498 ntBASIC16.69■□□□□ 0.26
SOX1O00570 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.69■□□□□ 0.26
SOX1O00570 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 C2orf69P1-201ENST00000563532 1093 ntBASIC16.69■□□□□ 0.26
SOX1O00570 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 FO393412.1-201ENST00000619841 382 ntBASIC16.69■□□□□ 0.26
SOX1O00570 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.69■□□□□ 0.26
SOX1O00570 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.69■□□□□ 0.26
SOX1O00570 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 AC074138.1-201ENST00000611182 1303 ntBASIC16.69■□□□□ 0.26
SOX1O00570 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SOX1O00570 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SOX1O00570 AC007787.1-201ENST00000588095 1583 ntBASIC16.68■□□□□ 0.26
SOX1O00570 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SOX1O00570 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SOX1O00570 AL354751.1-201ENST00000412768 1863 ntBASIC16.68■□□□□ 0.26
SOX1O00570 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SOX1O00570 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SOX1O00570 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.68■□□□□ 0.26
SOX1O00570 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.68■□□□□ 0.26
SOX1O00570 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.68■□□□□ 0.26
SOX1O00570 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.68■□□□□ 0.26
SOX1O00570 KRT18P43-201ENST00000469825 1281 ntBASIC16.68■□□□□ 0.26
SOX1O00570 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.68■□□□□ 0.26
SOX1O00570 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.68■□□□□ 0.26
SOX1O00570 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.68■□□□□ 0.26
SOX1O00570 AC012158.2-201ENST00000536546 354 ntBASIC16.68■□□□□ 0.26
SOX1O00570 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 AL118516.1-201ENST00000564152 670 ntBASIC16.68■□□□□ 0.26
SOX1O00570 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.68■□□□□ 0.26
SOX1O00570 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SOX1O00570 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.68■□□□□ 0.26
SOX1O00570 AC051619.9-201ENST00000623237 597 ntBASIC16.68■□□□□ 0.26
SOX1O00570 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SOX1O00570 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.68■□□□□ 0.26
SOX1O00570 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX1O00570 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.68■□□□□ 0.26
SOX1O00570 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX1O00570 PCDHB17P-201ENST00000539533 2393 ntBASIC16.67■□□□□ 0.26
SOX1O00570 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX1O00570 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 AC007613.1-201ENST00000572811 2597 ntBASIC16.67■□□□□ 0.26
SOX1O00570 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.67■□□□□ 0.26
SOX1O00570 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SOX1O00570 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SOX1O00570 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.67■□□□□ 0.26
SOX1O00570 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 AL627231.1-201ENST00000394467 1125 ntBASIC16.67■□□□□ 0.26
SOX1O00570 HIST2H2BB-201ENST00000449108 381 ntBASIC16.67■□□□□ 0.26
SOX1O00570 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.67■□□□□ 0.26
SOX1O00570 AC100850.1-201ENST00000506768 649 ntBASIC16.67■□□□□ 0.26
SOX1O00570 FAM86KP-201ENST00000509817 987 ntBASIC16.67■□□□□ 0.26
SOX1O00570 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX1O00570 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.67■□□□□ 0.26
SOX1O00570 MIR4754-201ENST00000582477 89 ntBASIC16.67■□□□□ 0.26
SOX1O00570 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX1O00570 BNIP3P13-201ENST00000599968 566 ntBASIC16.67■□□□□ 0.26
SOX1O00570 AC138894.2-201ENST00000602838 371 ntBASIC16.67■□□□□ 0.26
SOX1O00570 TBC1D3J-201ENST00000620719 1426 ntBASIC16.67■□□□□ 0.26
SOX1O00570 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX1O00570 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SOX1O00570 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.67■□□□□ 0.26
SOX1O00570 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX1O00570 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 GGT4P-201ENST00000623672 1708 ntBASIC16.67■□□□□ 0.26
SOX1O00570 AC005622.1-201ENST00000636801 1703 ntBASIC16.67■□□□□ 0.26
SOX1O00570 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms