Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN5O00501 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CLDN5O00501 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN5O00501 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN5O00501 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLDN5O00501 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN5O00501 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN5O00501 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
CLDN5O00501 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLDN5O00501 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN5O00501 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 AL662799.1-202ENST00000614205 422 ntBASIC16.75■□□□□ 0.27
CLDN5O00501 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN5O00501 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN5O00501 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN5O00501 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN5O00501 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN5O00501 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLDN5O00501 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN5O00501 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 AC008894.3-201ENST00000624324 3103 ntBASIC16.74■□□□□ 0.27
CLDN5O00501 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN5O00501 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CLDN5O00501 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 AL139384.1-201ENST00000612143 3047 ntBASIC16.74■□□□□ 0.27
CLDN5O00501 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN5O00501 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLDN5O00501 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CLDN5O00501 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN5O00501 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN5O00501 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 MEIS3P1-201ENST00000495167 958 ntBASIC16.74■□□□□ 0.27
CLDN5O00501 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN5O00501 SPDYE22P-201ENST00000582158 798 ntBASIC16.74■□□□□ 0.27
CLDN5O00501 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN5O00501 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN5O00501 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN5O00501 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN5O00501 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN5O00501 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLDN5O00501 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN5O00501 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN5O00501 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN5O00501 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN5O00501 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN5O00501 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CLDN5O00501 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN5O00501 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN5O00501 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN5O00501 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN5O00501 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN5O00501 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.73■□□□□ 0.27
CLDN5O00501 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.73■□□□□ 0.27
CLDN5O00501 AP005018.1-201ENST00000525475 301 ntBASIC16.73■□□□□ 0.27
CLDN5O00501 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.73■□□□□ 0.27
CLDN5O00501 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN5O00501 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
CLDN5O00501 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN5O00501 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN5O00501 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms