Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXE1O00358 AL607033.1-201ENST00000623900 1599 ntBASIC15.16■□□□□ 0.02
FOXE1O00358 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
FOXE1O00358 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
FOXE1O00358 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXE1O00358 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 MIR1233-2-201ENST00000408138 82 ntBASIC15.16■□□□□ 0.02
FOXE1O00358 MIR1233-1-201ENST00000408722 82 ntBASIC15.16■□□□□ 0.02
FOXE1O00358 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXE1O00358 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXE1O00358 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXE1O00358 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXE1O00358 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXE1O00358 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXE1O00358 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXE1O00358 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 AC013268.4-201ENST00000637413 2228 ntBASIC15.16■□□□□ 0.02
FOXE1O00358 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXE1O00358 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXE1O00358 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
FOXE1O00358 CETN4P-206ENST00000642099 2168 ntBASIC15.15■□□□□ 0.02
FOXE1O00358 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
FOXE1O00358 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXE1O00358 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXE1O00358 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXE1O00358 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXE1O00358 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXE1O00358 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
FOXE1O00358 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 AL589739.1-201ENST00000607720 493 ntBASIC15.15■□□□□ 0.02
FOXE1O00358 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXE1O00358 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXE1O00358 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXE1O00358 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXE1O00358 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXE1O00358 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXE1O00358 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXE1O00358 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXE1O00358 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXE1O00358 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXE1O00358 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXE1O00358 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms