Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC7O00311 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDC7O00311 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC7O00311 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC7O00311 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC7O00311 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC7O00311 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC7O00311 MIR3687-2-201ENST00000577708 61 ntBASIC15.65■□□□□ 0.1
CDC7O00311 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC7O00311 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC7O00311 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CDC7O00311 MIR3687-1-201ENST00000614492 61 ntBASIC15.65■□□□□ 0.1
CDC7O00311 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC7O00311 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDC7O00311 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC7O00311 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDC7O00311 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDC7O00311 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC7O00311 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
CDC7O00311 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC7O00311 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDC7O00311 AC087481.3-201ENST00000602886 1894 ntBASIC15.65■□□□□ 0.1
CDC7O00311 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC7O00311 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC7O00311 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDC7O00311 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 UPF3AP3-201ENST00000420996 769 ntBASIC15.64■□□□□ 0.09
CDC7O00311 GPS2P2-201ENST00000430745 888 ntBASIC15.64■□□□□ 0.09
CDC7O00311 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.64■□□□□ 0.09
CDC7O00311 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.64■□□□□ 0.09
CDC7O00311 BANF1P1-201ENST00000553684 263 ntBASIC15.64■□□□□ 0.09
CDC7O00311 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.64■□□□□ 0.09
CDC7O00311 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
CDC7O00311 AL450472.2-201ENST00000603663 1156 ntBASIC15.64■□□□□ 0.09
CDC7O00311 AC026979.3-201ENST00000607315 403 ntBASIC15.64■□□□□ 0.09
CDC7O00311 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.64■□□□□ 0.09
CDC7O00311 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC7O00311 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC7O00311 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDC7O00311 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
CDC7O00311 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC7O00311 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 TMBIM7P-203ENST00000641617 1718 ntBASIC15.63■□□□□ 0.09
CDC7O00311 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDC7O00311 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDC7O00311 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDC7O00311 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDC7O00311 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC7O00311 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CDC7O00311 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms