Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TLR4O00206 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TLR4O00206 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TLR4O00206 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TLR4O00206 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.78■□□□□ 0.12
TLR4O00206 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.78■□□□□ 0.12
TLR4O00206 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TLR4O00206 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TLR4O00206 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TLR4O00206 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TLR4O00206 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TLR4O00206 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.77■□□□□ 0.12
TLR4O00206 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TLR4O00206 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TLR4O00206 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.77■□□□□ 0.12
TLR4O00206 MIR1909-201ENST00000411312 80 ntBASIC15.77■□□□□ 0.12
TLR4O00206 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.77■□□□□ 0.12
TLR4O00206 AC245100.5-201ENST00000452108 331 ntBASIC15.77■□□□□ 0.12
TLR4O00206 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TLR4O00206 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TLR4O00206 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.77■□□□□ 0.12
TLR4O00206 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TLR4O00206 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TLR4O00206 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.77■□□□□ 0.11
TLR4O00206 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.77■□□□□ 0.11
TLR4O00206 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.77■□□□□ 0.11
TLR4O00206 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.77■□□□□ 0.11
TLR4O00206 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 AL391005.1-201ENST00000623953 2435 ntBASIC15.77■□□□□ 0.11
TLR4O00206 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TLR4O00206 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.77■□□□□ 0.11
TLR4O00206 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TLR4O00206 CDC14C-201ENST00000428251 1719 ntBASIC15.77■□□□□ 0.11
TLR4O00206 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 PCDHA1-201ENST00000378133 2726 ntBASIC15.76■□□□□ 0.11
TLR4O00206 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TLR4O00206 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.76■□□□□ 0.11
TLR4O00206 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TLR4O00206 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 MIR658-201ENST00000385210 100 ntBASIC15.76■□□□□ 0.11
TLR4O00206 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.76■□□□□ 0.11
TLR4O00206 RN7SL399P-201ENST00000471648 279 ntBASIC15.76■□□□□ 0.11
TLR4O00206 AC092552.1-201ENST00000547243 906 ntBASIC15.76■□□□□ 0.11
TLR4O00206 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TLR4O00206 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.76■□□□□ 0.11
TLR4O00206 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.76■□□□□ 0.11
TLR4O00206 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.76■□□□□ 0.11
TLR4O00206 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.76■□□□□ 0.11
TLR4O00206 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.76■□□□□ 0.11
TLR4O00206 KRT8P37-201ENST00000451609 1420 ntBASIC15.76■□□□□ 0.11
TLR4O00206 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.76■□□□□ 0.11
TLR4O00206 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TLR4O00206 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TLR4O00206 CYP2T1P-202ENST00000641596 2535 ntBASIC15.75■□□□□ 0.11
TLR4O00206 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TLR4O00206 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TLR4O00206 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TLR4O00206 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TLR4O00206 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TLR4O00206 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TLR4O00206 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TLR4O00206 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TLR4O00206 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TLR4O00206 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TLR4O00206 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms