Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 GPX1P2-201ENST00000429271 606 ntBASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 SART3-203ENST00000546611 1184 ntBASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 MIR4313-201ENST00000580760 101 ntBASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 HMGA1P7-201ENST00000406908 502 ntBASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 DUSP5P1-201ENST00000441325 1139 ntBASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 AL589702.1-201ENST00000641229 1509 ntBASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.04□□□□□ -0.16
TRDV1A0A1B0GX56 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 MIR600HG-201ENST00000449175 5984 ntBASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms