Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AGAP14-201ENST00000624701 2060 ntBASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.77□□□□□ -0.2
TRAV18A0A075B6X5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV18A0A075B6X5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.77□□□□□ -0.2
TRAV18A0A075B6X5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV18A0A075B6X5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV18A0A075B6X5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV18A0A075B6X5 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 AC026396.1-201ENST00000419388 421 ntBASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 AC006557.2-201ENST00000592985 1240 ntBASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 AC092119.3-201ENST00000612618 583 ntBASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 NPAP1P7-201ENST00000613027 823 ntBASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV18A0A075B6X5 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 AC245100.5-201ENST00000452108 331 ntBASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 AL355877.3-201ENST00000622820 899 ntBASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 AL359258.3-201ENST00000622910 2331 ntBASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 AC013726.1-201ENST00000563747 2285 ntBASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRAV18A0A075B6X5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 LINC00528-201ENST00000600723 2160 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms