Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 LINC00552-201ENST00000625151 2579 ntBASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 OR2I1P-210ENST00000642037 4691 ntBASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.4■□□□□ 0.06
AP4B1Q9Y6B7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 MED15P5-201ENST00000423150 992 ntBASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms