Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 MYCLP2-201ENST00000449268 967 ntBASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 PKD1P5-201ENST00000532415 10291 ntBASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 HLA-A-202ENST00000376806 1854 ntBASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 CROCCP1-201ENST00000426910 5675 ntBASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 AC112492.5-201ENST00000421897 457 ntBASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 RN7SL837P-201ENST00000463010 287 ntBASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 AC093726.1-201ENST00000608064 963 ntBASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA9Q9Y5G4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC022494.1-201ENST00000466044 728 ntBASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC123567.1-201ENST00000548294 1261 ntBASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC023310.3-201ENST00000557027 670 ntBASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC100756.1-201ENST00000562736 682 ntBASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC138749.3-201ENST00000567691 622 ntBASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC092337.1-201ENST00000568699 1129 ntBASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 AC116165.1-201ENST00000611806 668 ntBASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms