Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 AP001269.4-201ENST00000609611 512 ntBASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 AC117500.6-201ENST00000624871 588 ntBASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 AP003680.1-201ENST00000598970 3660 ntBASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 AC129492.6-201ENST00000611383 1305 ntBASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 PCDHA3-202ENST00000532566 4594 ntBASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 AC139749.1-202ENST00000617529 3139 ntBASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 AC126365.1-201ENST00000578585 1514 ntBASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 AL671883.3-201ENST00000603274 991 ntBASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 BX640515.1-201ENST00000617215 977 ntBASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 AC004706.3-202ENST00000621574 984 ntBASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 KRT8P44-201ENST00000441609 1350 ntBASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGB1Q9Y5G3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 HLA-A-201ENST00000376802 1334 ntBASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 PTCHD3P3-201ENST00000403073 906 ntBASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGB1Q9Y5G3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms