Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB6Q9Y5F9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 AC022532.1-201ENST00000624563 1728 ntBASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 MIR6080-201ENST00000617359 66 ntBASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB6Q9Y5F9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AL512652.2-201ENST00000625156 1716 ntBASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 ALOX12P2-203ENST00000570921 1945 ntBASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AC073347.1-201ENST00000421633 2643 ntBASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms