Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PPARGC1AQ9UBK2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PPARGC1AQ9UBK2 TUBB3P1-201ENST00000405796 1332 ntBASIC16.67■□□□□ 0.26
PPARGC1AQ9UBK2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.67■□□□□ 0.26
PPARGC1AQ9UBK2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PPARGC1AQ9UBK2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PPARGC1AQ9UBK2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PPARGC1AQ9UBK2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 HAUS4P1-201ENST00000406739 1145 ntBASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 AL139010.1-201ENST00000454878 894 ntBASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PPARGC1AQ9UBK2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 AC144831.1-201ENST00000573312 2656 ntBASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 AC092384.3-202ENST00000564646 2873 ntBASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PPARGC1AQ9UBK2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms