Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 RARRES2P5-201ENST00000564013 466 ntBASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 AC093726.1-201ENST00000608064 963 ntBASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 AL391069.4-201ENST00000609583 481 ntBASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.15□□□□□ -0.14
CLCF1Q9UBD9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CLCF1Q9UBD9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AC123567.1-201ENST00000548294 1261 ntBASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AL596087.1-201ENST00000400979 1969 ntBASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLCF1Q9UBD9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms