Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 TARDBPP1-201ENST00000442013 1203 ntBASIC16.96■□□□□ 0.31
CISHQ9NSE2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 AC025048.3-201ENST00000590609 569 ntBASIC16.96■□□□□ 0.31
CISHQ9NSE2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CISHQ9NSE2 AC005702.4-201ENST00000618393 416 ntBASIC16.96■□□□□ 0.31
CISHQ9NSE2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CISHQ9NSE2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CISHQ9NSE2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.96■□□□□ 0.3
CISHQ9NSE2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CISHQ9NSE2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CISHQ9NSE2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.95■□□□□ 0.3
CISHQ9NSE2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CISHQ9NSE2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CISHQ9NSE2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms