Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AP005117.1-202ENST00000581724 1908 ntBASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 AC073347.1-201ENST00000421633 2643 ntBASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 KRT18P67-201ENST00000432816 1264 ntBASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 FAM197Y8-203ENST00000450145 560 ntBASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 CXCL1P1-201ENST00000502804 216 ntBASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 AL031055.1-201ENST00000606362 631 ntBASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 AL365330.1-201ENST00000607459 531 ntBASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 TP73-AS1-207ENST00000624167 988 ntBASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 PTENP1-202ENST00000532280 3996 ntBASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDHB16Q9NRJ7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms