Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UPF2Q9HAU5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
UPF2Q9HAU5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPF2Q9HAU5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPF2Q9HAU5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 SAPCD2P3-201ENST00000455031 850 ntBASIC19.64■□□□□ 0.73
UPF2Q9HAU5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 AL031432.2-201ENST00000566714 459 ntBASIC19.64■□□□□ 0.73
UPF2Q9HAU5 AL928711.1-201ENST00000570165 459 ntBASIC19.64■□□□□ 0.73
UPF2Q9HAU5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF2Q9HAU5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 GOLGA8DP-202ENST00000341390 2184 ntBASIC19.63■□□□□ 0.73
UPF2Q9HAU5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 LINC01101-201ENST00000622953 1884 ntBASIC19.63■□□□□ 0.73
UPF2Q9HAU5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.63■□□□□ 0.73
UPF2Q9HAU5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 AC005593.1-201ENST00000624894 515 ntBASIC19.63■□□□□ 0.73
UPF2Q9HAU5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UPF2Q9HAU5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 CICP24-201ENST00000605464 2705 ntBASIC19.62■□□□□ 0.73
UPF2Q9HAU5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 RPS2P1-201ENST00000434010 821 ntBASIC19.62■□□□□ 0.73
UPF2Q9HAU5 KRT18P34-201ENST00000488218 1270 ntBASIC19.62■□□□□ 0.73
UPF2Q9HAU5 AC073648.2-201ENST00000510116 352 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms