Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PC-214ENST00000628663 1470 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LST1-206ENST00000376090 689 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LST1-209ENST00000376096 565 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LST1-210ENST00000376099 610 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LST1-214ENST00000418507 726 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AL359075.1-203ENST00000462729 1002 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC009533.2-201ENST00000543664 586 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TERC-201ENST00000602385 541 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 Z99916.2-201ENST00000604037 246 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AL138831.2-201ENST00000606564 490 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC010654.1-201ENST00000615722 808 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC073592.5-201ENST00000624854 528 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC141257.4-201ENST00000634557 245 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC136944.6-201ENST00000634818 245 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 HADH-212ENST00000638621 741 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms