Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GABARAPL3Q9BY60 BNIP3P1-202ENST00000550043 1585 ntBASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 AC092474.2-201ENST00000424288 719 ntBASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 FAM8A3P-201ENST00000427218 844 ntBASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GABARAPL3Q9BY60 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 AL691432.1-201ENST00000596308 1422 ntBASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 PRSS29P-201ENST00000440800 595 ntBASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 PRYP6-201ENST00000514804 343 ntBASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 AC105339.3-201ENST00000560043 636 ntBASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 AC140479.7-201ENST00000636301 2332 ntBASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GABARAPL3Q9BY60 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABARAPL3Q9BY60 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GABARAPL3Q9BY60 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABARAPL3Q9BY60 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABARAPL3Q9BY60 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABARAPL3Q9BY60 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.49□□□□□ -0.09
GABARAPL3Q9BY60 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABARAPL3Q9BY60 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms