Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 CICP14-201ENST00000629111 2732 ntBASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 PAWRP1-201ENST00000451083 565 ntBASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 MIR5100-201ENST00000579544 119 ntBASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 OR2I1P-209ENST00000641730 5365 ntBASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 MIR3652-201ENST00000579335 131 ntBASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 AC073592.4-201ENST00000623827 446 ntBASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CHMP6Q96FZ7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 AC126365.1-201ENST00000578585 1514 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms