Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 AC105339.1-204ENST00000636249 355 ntBASIC16.88■□□□□ 0.29
TRIM11Q96F44 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 AL353705.2-201ENST00000428243 662 ntBASIC16.87■□□□□ 0.29
TRIM11Q96F44 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 PHKG1P2-201ENST00000457537 863 ntBASIC16.87■□□□□ 0.29
TRIM11Q96F44 MIR4313-201ENST00000580760 101 ntBASIC16.87■□□□□ 0.29
TRIM11Q96F44 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 AC022145.2-201ENST00000598203 171 ntBASIC16.87■□□□□ 0.29
TRIM11Q96F44 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 AC136621.1-201ENST00000624017 2304 ntBASIC16.87■□□□□ 0.29
TRIM11Q96F44 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM11Q96F44 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM11Q96F44 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 AC005237.2-201ENST00000434368 219 ntBASIC16.86■□□□□ 0.29
TRIM11Q96F44 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms