Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 AC012044.1-201ENST00000603431 297 ntBASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 AC136604.1-201ENST00000418535 575 ntBASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 MARK2P5-201ENST00000507649 634 ntBASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 MIR5196-201ENST00000578146 115 ntBASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PRUNE2Q8WUY3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 DPM3-202ENST00000368399 517 ntBASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 AP002803.1-201ENST00000528836 498 ntBASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 LINC02012-201ENST00000608206 1725 ntBASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 MIR6858-201ENST00000620733 67 ntBASIC16.25■□□□□ 0.19
PRUNE2Q8WUY3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 TUBB7P-202ENST00000428444 1305 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 NDUFS6P1-201ENST00000485187 316 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 FAM86KP-201ENST00000509817 987 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 RBM8B-201ENST00000555532 525 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 AC020922.3-201ENST00000595064 547 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms