Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNED1Q8TER0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 AC018892.3-201ENST00000623986 2499 ntBASIC19.08■□□□□ 0.64
SNED1Q8TER0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 NKILA-202ENST00000614771 2598 ntBASIC19.08■□□□□ 0.64
SNED1Q8TER0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.08■□□□□ 0.64
SNED1Q8TER0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.08■□□□□ 0.64
SNED1Q8TER0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNED1Q8TER0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 KRT18P25-201ENST00000508931 1278 ntBASIC19.07■□□□□ 0.64
SNED1Q8TER0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 AC020914.3-201ENST00000594712 304 ntBASIC19.07■□□□□ 0.64
SNED1Q8TER0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SNED1Q8TER0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNED1Q8TER0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.06■□□□□ 0.64
SNED1Q8TER0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 AL451050.2-201ENST00000606967 682 ntBASIC19.06■□□□□ 0.64
SNED1Q8TER0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 AL138799.1-201ENST00000448213 1675 ntBASIC19.06■□□□□ 0.64
SNED1Q8TER0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SNED1Q8TER0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNED1Q8TER0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 AL023775.1-201ENST00000454907 1746 ntBASIC19.05■□□□□ 0.64
SNED1Q8TER0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 AC091046.1-201ENST00000331871 207 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms