Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.08■□□□□ 0.16
BCAS4Q8TDM0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 GUSBP12-201ENST00000513727 720 ntBASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 Z99916.2-201ENST00000604037 246 ntBASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 AL023973.1-201ENST00000624619 620 ntBASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BCAS4Q8TDM0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 AC097359.2-201ENST00000604992 2389 ntBASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 PMPCAP1-201ENST00000508114 1576 ntBASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 AL359075.1-203ENST00000462729 1002 ntBASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 AC091167.2-201ENST00000579581 588 ntBASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.06■□□□□ 0.16
BCAS4Q8TDM0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms