Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 RN7SKP175-201ENST00000408472 289 ntBASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 TUBB8P8-201ENST00000458717 1058 ntBASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 GMFG-209ENST00000600322 622 ntTSL 5 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 AL132994.2-201ENST00000603120 687 ntBASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 AL136295.7-201ENST00000619226 1200 ntBASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 RN7SKP214-201ENST00000364208 315 ntBASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 AC007881.3-201ENST00000608897 607 ntBASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL22A1Q8NFW1 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AC105020.1-201ENST00000435356 2205 ntBASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AC090857.1-201ENST00000527400 390 ntBASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 RPL17P45-201ENST00000586289 509 ntBASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AL358472.3-201ENST00000608147 415 ntBASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL22A1Q8NFW1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 TBC1D3J-201ENST00000620719 1426 ntBASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 MIR1227-201ENST00000408484 88 ntBASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 DNM1P30-201ENST00000563586 452 ntBASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.65■□□□□ 0.9
COL22A1Q8NFW1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms