Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL9Q8NET4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL9Q8NET4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL9Q8NET4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL9Q8NET4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RTL9Q8NET4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 MIR1908-201ENST00000410394 80 ntBASIC19.46■□□□□ 0.71
RTL9Q8NET4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 GAPDHP40-201ENST00000505218 1006 ntBASIC19.46■□□□□ 0.71
RTL9Q8NET4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 MIR4313-201ENST00000580760 101 ntBASIC19.46■□□□□ 0.71
RTL9Q8NET4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 DRD5P1-201ENST00000456605 1438 ntBASIC19.46■□□□□ 0.71
RTL9Q8NET4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RTL9Q8NET4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL9Q8NET4 AL596087.1-201ENST00000400979 1969 ntBASIC19.46■□□□□ 0.7
RTL9Q8NET4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
RTL9Q8NET4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 AP001889.1-201ENST00000525414 633 ntBASIC19.45■□□□□ 0.7
RTL9Q8NET4 TDH-203ENST00000531764 1110 ntBASIC19.45■□□□□ 0.7
RTL9Q8NET4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 AL583810.1-201ENST00000553344 1045 ntBASIC19.45■□□□□ 0.7
RTL9Q8NET4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RTL9Q8NET4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL9Q8NET4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 ACTBP11-201ENST00000436287 1126 ntBASIC19.44■□□□□ 0.7
RTL9Q8NET4 AC245100.3-201ENST00000441281 285 ntBASIC19.44■□□□□ 0.7
RTL9Q8NET4 CTBP2P5-201ENST00000454986 1264 ntBASIC19.44■□□□□ 0.7
RTL9Q8NET4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms