Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 SCARNA20.5-201ENST00000516991 142 ntBASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 AC022211.2-201ENST00000585075 2527 ntBASIC17.34■□□□□ 0.37
KLHDC9Q8NEP7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
KLHDC9Q8NEP7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHDC9Q8NEP7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHDC9Q8NEP7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.33■□□□□ 0.37
KLHDC9Q8NEP7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.33■□□□□ 0.37
KLHDC9Q8NEP7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
KLHDC9Q8NEP7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
KLHDC9Q8NEP7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 ACTBP8-201ENST00000403258 1108 ntBASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 AL096828.3-201ENST00000615354 462 ntBASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 AC011477.6-201ENST00000604980 1927 ntBASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KLHDC9Q8NEP7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 AC018735.1-201ENST00000437208 1502 ntBASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 FNTAP2-201ENST00000430308 634 ntBASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms