Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 API5-211ENST00000534695 560 ntTSL 5 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 SPDYE22P-201ENST00000582158 798 ntBASIC18.46■□□□□ 0.55
PNMA1Q8ND90 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.46■□□□□ 0.55
PNMA1Q8ND90 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PNMA1Q8ND90 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 SLC7A15P-201ENST00000424028 1363 ntBASIC18.45■□□□□ 0.54
PNMA1Q8ND90 AL365203.3-201ENST00000609742 2057 ntBASIC18.45■□□□□ 0.54
PNMA1Q8ND90 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.45■□□□□ 0.54
PNMA1Q8ND90 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 AL353779.1-201ENST00000434793 351 ntBASIC18.45■□□□□ 0.54
PNMA1Q8ND90 COX20P2-201ENST00000452636 358 ntBASIC18.45■□□□□ 0.54
PNMA1Q8ND90 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PNMA1Q8ND90 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 TOMM22P5-201ENST00000416399 439 ntBASIC18.44■□□□□ 0.54
PNMA1Q8ND90 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 AC055876.2-201ENST00000531834 546 ntBASIC18.44■□□□□ 0.54
PNMA1Q8ND90 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.44■□□□□ 0.54
PNMA1Q8ND90 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 AL662799.1-202ENST00000614205 422 ntBASIC18.44■□□□□ 0.54
PNMA1Q8ND90 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PNMA1Q8ND90 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms