Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 AC020658.6-201ENST00000623564 1870 ntBASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 BNIP3P1-202ENST00000550043 1585 ntBASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 AL671883.3-201ENST00000603274 991 ntBASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.65□□□□□ -0.06
LSMEM1Q8N8F7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
LSMEM1Q8N8F7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 ELL2P1-201ENST00000413990 1906 ntBASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 CR383656.2-201ENST00000548656 2254 ntBASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 AL359258.3-201ENST00000622910 2331 ntBASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 TIMM8BP1-201ENST00000452384 211 ntBASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 AC055717.3-201ENST00000622967 595 ntBASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSMEM1Q8N8F7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms