Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 AC092127.1-201ENST00000567093 3455 ntBASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 MCCD1P2-201ENST00000423228 335 ntBASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 ALG1L5P-201ENST00000482043 771 ntBASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 AC079140.1-201ENST00000508039 487 ntBASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 IGHV3-62-201ENST00000520057 340 ntBASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 SSR4P1-203ENST00000599569 2260 ntBASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 AP000842.3-202ENST00000569238 1080 ntBASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms