Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 AL512652.2-201ENST00000625156 1716 ntBASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.52□□□□□ -0.08
CROCCP3Q8IVE0 MMP23A-201ENST00000234610 1017 ntBASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 PRORSD1P-201ENST00000295112 541 ntBASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 AC092597.1-201ENST00000487352 616 ntBASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 AC105250.1-201ENST00000509378 2057 ntBASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 PCGF3-213ENST00000620529 1899 ntBASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CROCCP3Q8IVE0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 KRT18P22-201ENST00000402024 1347 ntBASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 NUS1P1-201ENST00000446295 882 ntBASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 COX11P1-201ENST00000489116 835 ntBASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CROCCP3Q8IVE0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 TOP3BP1-201ENST00000420768 1380 ntBASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms