Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX6Q8HWS3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.62■□□□□ 0.25
RFX6Q8HWS3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 AC069335.1-201ENST00000489972 472 ntBASIC16.62■□□□□ 0.25
RFX6Q8HWS3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 AC018892.3-201ENST00000623986 2499 ntBASIC16.62■□□□□ 0.25
RFX6Q8HWS3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 AC126177.1-201ENST00000547829 2218 ntBASIC16.62■□□□□ 0.25
RFX6Q8HWS3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 AC144831.1-201ENST00000573312 2656 ntBASIC16.62■□□□□ 0.25
RFX6Q8HWS3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX6Q8HWS3 AC104640.1-201ENST00000562617 2109 ntBASIC16.61■□□□□ 0.25
RFX6Q8HWS3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 AP000347.1-202ENST00000435868 847 ntBASIC16.61■□□□□ 0.25
RFX6Q8HWS3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 AL136982.4-201ENST00000437689 1740 ntBASIC16.61■□□□□ 0.25
RFX6Q8HWS3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms