Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 ALOX12P2-203ENST00000570921 1945 ntBASIC10.88□□□□□ -0.67
CSMD3Q7Z407 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 HIST2H2BB-201ENST00000449108 381 ntBASIC10.88□□□□□ -0.67
CSMD3Q7Z407 KRT18P66-201ENST00000452970 1269 ntBASIC10.88□□□□□ -0.67
CSMD3Q7Z407 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AC022188.1-201ENST00000620960 1664 ntBASIC10.88□□□□□ -0.67
CSMD3Q7Z407 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 AC006480.2-201ENST00000609770 1337 ntBASIC10.88□□□□□ -0.67
CSMD3Q7Z407 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 PFN2-202ENST00000423691 911 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 KLK11-210ENST00000600362 759 ntTSL 3 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AL354989.2-201ENST00000435838 1540 ntBASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AC114501.1-201ENST00000445949 172 ntBASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AC126915.1-201ENST00000522847 1038 ntBASIC10.87□□□□□ -0.67
CSMD3Q7Z407 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 RNU1-114P-201ENST00000365297 166 ntBASIC10.87□□□□□ -0.67
CSMD3Q7Z407 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms