Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.66□□□□□ -0.7
SCXQ7RTU7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SCXQ7RTU7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.66□□□□□ -0.7
SCXQ7RTU7 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.66□□□□□ -0.7
SCXQ7RTU7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC10.66□□□□□ -0.7
SCXQ7RTU7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.66□□□□□ -0.7
SCXQ7RTU7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC10.66□□□□□ -0.7
SCXQ7RTU7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SCXQ7RTU7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SCXQ7RTU7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 AC093525.9-201ENST00000624961 1746 ntBASIC10.65□□□□□ -0.7
SCXQ7RTU7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 BCRP1-201ENST00000444246 691 ntBASIC10.65□□□□□ -0.7
SCXQ7RTU7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 MTRF1LP2-201ENST00000506027 1122 ntBASIC10.65□□□□□ -0.7
SCXQ7RTU7 AC109635.5-201ENST00000533593 962 ntBASIC10.65□□□□□ -0.7
SCXQ7RTU7 AC091167.2-201ENST00000579581 588 ntBASIC10.65□□□□□ -0.7
SCXQ7RTU7 AC005498.2-205ENST00000593218 784 ntBASIC10.65□□□□□ -0.7
SCXQ7RTU7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
SCXQ7RTU7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCXQ7RTU7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC10.65□□□□□ -0.71
SCXQ7RTU7 BID-213ENST00000615414 2236 ntTSL 5 BASIC10.65□□□□□ -0.71
SCXQ7RTU7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SCXQ7RTU7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.65□□□□□ -0.71
SCXQ7RTU7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.65□□□□□ -0.71
SCXQ7RTU7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SCXQ7RTU7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SCXQ7RTU7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SCXQ7RTU7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
SCXQ7RTU7 TOP3BP1-201ENST00000420768 1380 ntBASIC10.65□□□□□ -0.71
SCXQ7RTU7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SCXQ7RTU7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.71
SCXQ7RTU7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 UXT-AS1-201ENST00000590504 1525 ntBASIC10.64□□□□□ -0.71
SCXQ7RTU7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCXQ7RTU7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC10.64□□□□□ -0.71
SCXQ7RTU7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms