Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 AC005237.2-201ENST00000434368 219 ntBASIC17.96■□□□□ 0.47
SHC4Q6S5L8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 AC026979.3-201ENST00000607315 403 ntBASIC17.96■□□□□ 0.47
SHC4Q6S5L8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SHC4Q6S5L8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
SHC4Q6S5L8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
SHC4Q6S5L8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 AL627223.1-201ENST00000416693 442 ntBASIC17.95■□□□□ 0.46
SHC4Q6S5L8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 AL607033.1-201ENST00000623900 1599 ntBASIC17.95■□□□□ 0.46
SHC4Q6S5L8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC4Q6S5L8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 KRT8P44-201ENST00000441609 1350 ntBASIC17.94■□□□□ 0.46
SHC4Q6S5L8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 AC105021.1-202ENST00000570572 669 ntBASIC17.94■□□□□ 0.46
SHC4Q6S5L8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SHC4Q6S5L8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHC4Q6S5L8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms