Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.42□□□□□ -0.1
RTL6Q6ICC9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 U82695.1-201ENST00000635752 1889 ntBASIC14.42□□□□□ -0.1
RTL6Q6ICC9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 AC067930.6-201ENST00000623257 4947 ntBASIC14.41□□□□□ -0.1
RTL6Q6ICC9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 CHCHD2P3-201ENST00000603038 451 ntBASIC14.41□□□□□ -0.1
RTL6Q6ICC9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 AC004461.2-201ENST00000629517 803 ntBASIC14.41□□□□□ -0.1
RTL6Q6ICC9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 PCDHA1-201ENST00000378133 2726 ntBASIC14.41□□□□□ -0.1
RTL6Q6ICC9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.41□□□□□ -0.1
RTL6Q6ICC9 CU639417.3-201ENST00000624240 1404 ntBASIC14.41□□□□□ -0.1
RTL6Q6ICC9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 DGCR5-201ENST00000399539 862 ntBASIC14.4□□□□□ -0.1
RTL6Q6ICC9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 MEIS3P1-201ENST00000495167 958 ntBASIC14.4□□□□□ -0.1
RTL6Q6ICC9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 SRD5A3P1-201ENST00000603021 949 ntBASIC14.4□□□□□ -0.1
RTL6Q6ICC9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms