Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPIN4Q56A73 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.25■□□□□ 0.03
SPIN4Q56A73 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPIN4Q56A73 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.25■□□□□ 0.03
SPIN4Q56A73 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SPIN4Q56A73 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 AC018892.3-201ENST00000623986 2499 ntBASIC15.24■□□□□ 0.03
SPIN4Q56A73 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 KRT18P32-201ENST00000424695 1287 ntBASIC15.24■□□□□ 0.03
SPIN4Q56A73 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 AL513210.1-201ENST00000629608 234 ntBASIC15.24■□□□□ 0.03
SPIN4Q56A73 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SPIN4Q56A73 AC105250.1-201ENST00000509378 2057 ntBASIC15.24■□□□□ 0.03
SPIN4Q56A73 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPIN4Q56A73 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AC136621.1-201ENST00000624017 2304 ntBASIC15.23■□□□□ 0.03
SPIN4Q56A73 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 MIR3687-2-201ENST00000577708 61 ntBASIC15.23■□□□□ 0.03
SPIN4Q56A73 MIR4469-201ENST00000583919 79 ntBASIC15.23■□□□□ 0.03
SPIN4Q56A73 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 MIR3687-1-201ENST00000614492 61 ntBASIC15.23■□□□□ 0.03
SPIN4Q56A73 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.23■□□□□ 0.03
SPIN4Q56A73 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPIN4Q56A73 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms