Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.02■□□□□ 0.31
CTC1Q2NKJ3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTC1Q2NKJ3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTC1Q2NKJ3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTC1Q2NKJ3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTC1Q2NKJ3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 PAUPAR-201ENST00000630360 2965 ntBASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AL022328.1-201ENST00000610050 478 ntBASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 AL139099.5-201ENST00000635274 300 ntBASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 KRT8P22-201ENST00000562317 1415 ntBASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.01■□□□□ 0.31
CTC1Q2NKJ3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 AL442647.2-201ENST00000429864 857 ntBASIC17■□□□□ 0.31
CTC1Q2NKJ3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 AC092364.2-201ENST00000596710 2692 ntBASIC17■□□□□ 0.31
CTC1Q2NKJ3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 AL365203.3-201ENST00000609742 2057 ntBASIC17■□□□□ 0.31
CTC1Q2NKJ3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTC1Q2NKJ3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17■□□□□ 0.31
CTC1Q2NKJ3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms