Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.69■□□□□ 0.9
CALD1Q05682 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CALD1Q05682 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.69■□□□□ 0.9
CALD1Q05682 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.69■□□□□ 0.9
CALD1Q05682 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CALD1Q05682 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.69■□□□□ 0.9
CALD1Q05682 TSPY16P-201ENST00000449843 468 ntBASIC20.69■□□□□ 0.9
CALD1Q05682 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.69■□□□□ 0.9
CALD1Q05682 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.69■□□□□ 0.9
CALD1Q05682 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CALD1Q05682 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.69■□□□□ 0.9
CALD1Q05682 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.69■□□□□ 0.9
CALD1Q05682 AC018892.3-201ENST00000623986 2499 ntBASIC20.69■□□□□ 0.9
CALD1Q05682 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CALD1Q05682 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALD1Q05682 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.68■□□□□ 0.9
CALD1Q05682 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CALD1Q05682 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.68■□□□□ 0.9
CALD1Q05682 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CALD1Q05682 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.68■□□□□ 0.9
CALD1Q05682 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.68■□□□□ 0.9
CALD1Q05682 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.68■□□□□ 0.9
CALD1Q05682 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.68■□□□□ 0.9
CALD1Q05682 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.68■□□□□ 0.9
CALD1Q05682 UGT1A2P-201ENST00000454886 866 ntBASIC20.68■□□□□ 0.9
CALD1Q05682 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 AC092337.1-201ENST00000568699 1129 ntBASIC20.68■□□□□ 0.9
CALD1Q05682 MIR4313-201ENST00000580760 101 ntBASIC20.68■□□□□ 0.9
CALD1Q05682 AC004840.1-201ENST00000636359 365 ntBASIC20.68■□□□□ 0.9
CALD1Q05682 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.68■□□□□ 0.9
CALD1Q05682 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CALD1Q05682 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CALD1Q05682 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.68■□□□□ 0.9
CALD1Q05682 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALD1Q05682 PCDHA1-201ENST00000378133 2726 ntBASIC20.68■□□□□ 0.9
CALD1Q05682 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
CALD1Q05682 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CALD1Q05682 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.67■□□□□ 0.9
CALD1Q05682 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.67■□□□□ 0.9
CALD1Q05682 RPL13P2-201ENST00000440687 659 ntBASIC20.67■□□□□ 0.9
CALD1Q05682 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.67■□□□□ 0.9
CALD1Q05682 TIMM17BP1-201ENST00000545713 516 ntBASIC20.67■□□□□ 0.9
CALD1Q05682 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.67■□□□□ 0.9
CALD1Q05682 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CALD1Q05682 AC004461.2-201ENST00000629517 803 ntBASIC20.67■□□□□ 0.9
CALD1Q05682 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CALD1Q05682 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.67■□□□□ 0.9
CALD1Q05682 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms