Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.58□□□□□ -0.08
CXCR4P61073 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CXCR4P61073 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CXCR4P61073 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 ZBED1P1-201ENST00000502364 1930 ntBASIC14.57□□□□□ -0.08
CXCR4P61073 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 AC009090.5-201ENST00000624886 2285 ntBASIC14.57□□□□□ -0.08
CXCR4P61073 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.57□□□□□ -0.08
CXCR4P61073 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
CXCR4P61073 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.57□□□□□ -0.08
CXCR4P61073 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 SAPCD2P3-201ENST00000455031 850 ntBASIC14.57□□□□□ -0.08
CXCR4P61073 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 AC021097.1-201ENST00000607902 574 ntBASIC14.57□□□□□ -0.08
CXCR4P61073 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.57□□□□□ -0.08
CXCR4P61073 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CXCR4P61073 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CXCR4P61073 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CXCR4P61073 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.57□□□□□ -0.08
CXCR4P61073 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.57□□□□□ -0.08
CXCR4P61073 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CXCR4P61073 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CXCR4P61073 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 AC012569.1-201ENST00000591191 1524 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCR4P61073 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CXCR4P61073 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 AKR1C7P-201ENST00000305623 895 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 AC073621.1-201ENST00000392730 636 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 KRT18P27-201ENST00000427733 1299 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 UPK3BP1-201ENST00000428678 509 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms