Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AC127383.1-201ENST00000444697 1800 ntBASIC15.18■□□□□ 0.02
CLDN8P56748 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN8P56748 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN8P56748 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN8P56748 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.18■□□□□ 0.02
CLDN8P56748 ADH5P3-201ENST00000433842 1137 ntBASIC15.18■□□□□ 0.02
CLDN8P56748 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN8P56748 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.18■□□□□ 0.02
CLDN8P56748 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN8P56748 AC243562.1-201ENST00000560672 389 ntBASIC15.18■□□□□ 0.02
CLDN8P56748 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.18■□□□□ 0.02
CLDN8P56748 AL450472.2-201ENST00000603663 1156 ntBASIC15.18■□□□□ 0.02
CLDN8P56748 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN8P56748 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN8P56748 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
CLDN8P56748 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN8P56748 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN8P56748 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN8P56748 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 NORAD-201ENST00000565493 5339 ntBASIC15.17■□□□□ 0.02
CLDN8P56748 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 HLA-H-201ENST00000383620 1096 ntBASIC15.17■□□□□ 0.02
CLDN8P56748 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 FAM58CP-201ENST00000435741 640 ntBASIC15.17■□□□□ 0.02
CLDN8P56748 AL139010.1-201ENST00000454878 894 ntBASIC15.17■□□□□ 0.02
CLDN8P56748 PHKG1P2-201ENST00000457537 863 ntBASIC15.17■□□□□ 0.02
CLDN8P56748 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN8P56748 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
CLDN8P56748 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN8P56748 LINC01225-203ENST00000563550 1244 ntBASIC15.17■□□□□ 0.02
CLDN8P56748 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.17■□□□□ 0.02
CLDN8P56748 AP000842.3-202ENST00000569238 1080 ntBASIC15.17■□□□□ 0.02
CLDN8P56748 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN8P56748 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN8P56748 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.17■□□□□ 0.02
CLDN8P56748 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN8P56748 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
CLDN8P56748 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN8P56748 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN8P56748 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN8P56748 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN8P56748 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN8P56748 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 KRT8P37-201ENST00000451609 1420 ntBASIC15.17■□□□□ 0.02
CLDN8P56748 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN8P56748 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN8P56748 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CLDN8P56748 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN8P56748 CYP4F24P-201ENST00000586049 1580 ntBASIC15.16■□□□□ 0.02
CLDN8P56748 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CLDN8P56748 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN8P56748 SPCS2P4-201ENST00000436160 681 ntBASIC15.16■□□□□ 0.02
CLDN8P56748 EEF1DP4-201ENST00000446006 880 ntBASIC15.16■□□□□ 0.02
CLDN8P56748 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.16■□□□□ 0.02
CLDN8P56748 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
CLDN8P56748 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.16■□□□□ 0.02
CLDN8P56748 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN8P56748 KRT8P23-201ENST00000560090 1207 ntBASIC15.16■□□□□ 0.02
CLDN8P56748 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 AC026120.1-201ENST00000611536 926 ntBASIC15.16■□□□□ 0.02
CLDN8P56748 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLDN8P56748 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN8P56748 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms