Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.33■□□□□ 0.05
EPHA4P54764 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.33■□□□□ 0.05
EPHA4P54764 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
EPHA4P54764 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
EPHA4P54764 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EPHA4P54764 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
EPHA4P54764 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EPHA4P54764 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
EPHA4P54764 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
EPHA4P54764 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.33■□□□□ 0.05
EPHA4P54764 AC134407.2-201ENST00000625089 1978 ntBASIC15.33■□□□□ 0.05
EPHA4P54764 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
EPHA4P54764 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
EPHA4P54764 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHA4P54764 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
EPHA4P54764 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
EPHA4P54764 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.33■□□□□ 0.04
EPHA4P54764 INE1-201ENST00000456273 945 ntBASIC15.33■□□□□ 0.04
EPHA4P54764 ELK1P1-201ENST00000485699 580 ntBASIC15.33■□□□□ 0.04
EPHA4P54764 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHA4P54764 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHA4P54764 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.33■□□□□ 0.04
EPHA4P54764 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHA4P54764 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHA4P54764 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
EPHA4P54764 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.33■□□□□ 0.04
EPHA4P54764 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHA4P54764 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
EPHA4P54764 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
EPHA4P54764 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA4P54764 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
EPHA4P54764 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
EPHA4P54764 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.32■□□□□ 0.04
EPHA4P54764 TOMM22P5-201ENST00000416399 439 ntBASIC15.32■□□□□ 0.04
EPHA4P54764 AC074338.1-201ENST00000416825 156 ntBASIC15.32■□□□□ 0.04
EPHA4P54764 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
EPHA4P54764 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHA4P54764 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.32■□□□□ 0.04
EPHA4P54764 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 GIMAP3P-201ENST00000495150 836 ntBASIC15.32■□□□□ 0.04
EPHA4P54764 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 SLED1-202ENST00000512051 380 ntBASIC15.32■□□□□ 0.04
EPHA4P54764 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHA4P54764 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHA4P54764 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHA4P54764 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.32■□□□□ 0.04
EPHA4P54764 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.32■□□□□ 0.04
EPHA4P54764 AL158212.4-201ENST00000624062 1286 ntBASIC15.32■□□□□ 0.04
EPHA4P54764 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 FER1L4-210ENST00000615531 5998 ntBASIC15.32■□□□□ 0.04
EPHA4P54764 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.32■□□□□ 0.04
EPHA4P54764 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA4P54764 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA4P54764 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHA4P54764 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA4P54764 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.31■□□□□ 0.04
EPHA4P54764 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA4P54764 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA4P54764 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
EPHA4P54764 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA4P54764 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EPHA4P54764 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHA4P54764 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA4P54764 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms