Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HMGA2P52926 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HMGA2P52926 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGA2P52926 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGA2P52926 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGA2P52926 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGA2P52926 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGA2P52926 AP002472.1-201ENST00000577490 586 ntBASIC14.55□□□□□ -0.08
HMGA2P52926 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 AC104692.2-201ENST00000603054 253 ntBASIC14.55□□□□□ -0.08
HMGA2P52926 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
HMGA2P52926 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGA2P52926 BCAR1-209ENST00000546196 1340 ntBASIC14.55□□□□□ -0.08
HMGA2P52926 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGA2P52926 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGA2P52926 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
HMGA2P52926 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 AL136982.4-201ENST00000437689 1740 ntBASIC14.55□□□□□ -0.08
HMGA2P52926 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.55□□□□□ -0.08
HMGA2P52926 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGA2P52926 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 AC026748.1-201ENST00000624349 3251 ntBASIC14.54□□□□□ -0.08
HMGA2P52926 FER1L4-210ENST00000615531 5998 ntBASIC14.54□□□□□ -0.08
HMGA2P52926 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 AC002056.1-201ENST00000395613 760 ntBASIC14.54□□□□□ -0.08
HMGA2P52926 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
HMGA2P52926 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.54□□□□□ -0.08
HMGA2P52926 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HMGA2P52926 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HMGA2P52926 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGA2P52926 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HMGA2P52926 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HMGA2P52926 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 LINC00552-201ENST00000625151 2579 ntBASIC14.53□□□□□ -0.08
HMGA2P52926 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGA2P52926 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HMGA2P52926 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGA2P52926 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
HMGA2P52926 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms