Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA4P52798 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA4P52798 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNA4P52798 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNA4P52798 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 FER1L4-210ENST00000615531 5998 ntBASIC13.31□□□□□ -0.28
EFNA4P52798 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 AC006449.6-201ENST00000612330 2296 ntBASIC13.31□□□□□ -0.28
EFNA4P52798 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.31□□□□□ -0.28
EFNA4P52798 KRT223P-202ENST00000449164 1292 ntBASIC13.31□□□□□ -0.28
EFNA4P52798 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
EFNA4P52798 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNA4P52798 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
EFNA4P52798 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNA4P52798 SLC25A47P1-201ENST00000531577 414 ntBASIC13.31□□□□□ -0.28
EFNA4P52798 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNA4P52798 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 AL359711.2-201ENST00000563105 872 ntBASIC13.31□□□□□ -0.28
EFNA4P52798 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 COX11-210ENST00000639671 696 ntBASIC13.31□□□□□ -0.28
EFNA4P52798 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
EFNA4P52798 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNA4P52798 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA4P52798 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.3□□□□□ -0.28
EFNA4P52798 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 INTS4P2-202ENST00000614726 2019 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
EFNA4P52798 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
EFNA4P52798 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.3□□□□□ -0.28
EFNA4P52798 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA4P52798 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 MIR648-201ENST00000385046 94 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.3□□□□□ -0.28
EFNA4P52798 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
EFNA4P52798 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 KRT18P64-201ENST00000434946 1219 ntBASIC13.3□□□□□ -0.28
EFNA4P52798 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA4P52798 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.3□□□□□ -0.28
EFNA4P52798 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.3□□□□□ -0.28
EFNA4P52798 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
EFNA4P52798 USP32P1-208ENST00000506594 1164 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms