Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 BASP1P1-201ENST00000430708 665 ntBASIC17.28■□□□□ 0.36
PDE6CP51160 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6CP51160 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6CP51160 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6CP51160 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDE6CP51160 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6CP51160 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.28■□□□□ 0.36
PDE6CP51160 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.28■□□□□ 0.36
PDE6CP51160 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.28■□□□□ 0.36
PDE6CP51160 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 MIR6080-201ENST00000617359 66 ntBASIC17.28■□□□□ 0.36
PDE6CP51160 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PDE6CP51160 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6CP51160 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.28■□□□□ 0.36
PDE6CP51160 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDE6CP51160 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDE6CP51160 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDE6CP51160 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 AC104640.1-201ENST00000562617 2109 ntBASIC17.27■□□□□ 0.36
PDE6CP51160 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.27■□□□□ 0.36
PDE6CP51160 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDE6CP51160 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDE6CP51160 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PDE6CP51160 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDE6CP51160 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PDE6CP51160 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.27■□□□□ 0.36
PDE6CP51160 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.27■□□□□ 0.36
PDE6CP51160 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.27■□□□□ 0.36
PDE6CP51160 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PDE6CP51160 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PDE6CP51160 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.27■□□□□ 0.36
PDE6CP51160 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.27■□□□□ 0.36
PDE6CP51160 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PDE6CP51160 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.27■□□□□ 0.36
PDE6CP51160 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6CP51160 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
PDE6CP51160 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.27■□□□□ 0.36
PDE6CP51160 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.27■□□□□ 0.35
PDE6CP51160 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6CP51160 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6CP51160 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6CP51160 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6CP51160 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.27■□□□□ 0.35
PDE6CP51160 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6CP51160 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6CP51160 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.27■□□□□ 0.35
PDE6CP51160 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6CP51160 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6CP51160 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.27■□□□□ 0.35
PDE6CP51160 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PDE6CP51160 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6CP51160 AP003680.1-201ENST00000598970 3660 ntBASIC17.26■□□□□ 0.35
PDE6CP51160 AC023824.1-201ENST00000562945 2975 ntBASIC17.26■□□□□ 0.35
PDE6CP51160 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDE6CP51160 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.26■□□□□ 0.35
PDE6CP51160 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDE6CP51160 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6CP51160 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PDE6CP51160 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6CP51160 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6CP51160 RNA5SP410-201ENST00000516285 106 ntBASIC17.26■□□□□ 0.35
PDE6CP51160 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.26■□□□□ 0.35
PDE6CP51160 AC061975.2-201ENST00000581722 295 ntBASIC17.26■□□□□ 0.35
PDE6CP51160 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6CP51160 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.26■□□□□ 0.35
PDE6CP51160 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PDE6CP51160 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.26■□□□□ 0.35
PDE6CP51160 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDE6CP51160 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDE6CP51160 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms