Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.1■□□□□ 0.33
PSEN1P49768 AL359258.3-201ENST00000622910 2331 ntBASIC17.1■□□□□ 0.33
PSEN1P49768 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PSEN1P49768 AL023775.1-201ENST00000454907 1746 ntBASIC17.1■□□□□ 0.33
PSEN1P49768 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.09■□□□□ 0.33
PSEN1P49768 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PSEN1P49768 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.09■□□□□ 0.33
PSEN1P49768 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC17.09■□□□□ 0.33
PSEN1P49768 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.09■□□□□ 0.33
PSEN1P49768 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.09■□□□□ 0.33
PSEN1P49768 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.09■□□□□ 0.33
PSEN1P49768 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC17.09■□□□□ 0.33
PSEN1P49768 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.09■□□□□ 0.33
PSEN1P49768 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.09■□□□□ 0.33
PSEN1P49768 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PSEN1P49768 AL035456.1-201ENST00000456064 1369 ntBASIC17.09■□□□□ 0.33
PSEN1P49768 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.09■□□□□ 0.33
PSEN1P49768 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.09■□□□□ 0.33
PSEN1P49768 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PSEN1P49768 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSEN1P49768 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PSEN1P49768 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.09■□□□□ 0.33
PSEN1P49768 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.09■□□□□ 0.33
PSEN1P49768 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PSEN1P49768 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSEN1P49768 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PSEN1P49768 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PSEN1P49768 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.08■□□□□ 0.33
PSEN1P49768 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PSEN1P49768 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PSEN1P49768 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.08■□□□□ 0.33
PSEN1P49768 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PSEN1P49768 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.08■□□□□ 0.33
PSEN1P49768 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.08■□□□□ 0.33
PSEN1P49768 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSEN1P49768 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PSEN1P49768 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.08■□□□□ 0.32
PSEN1P49768 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.08■□□□□ 0.32
PSEN1P49768 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSEN1P49768 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSEN1P49768 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSEN1P49768 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PSEN1P49768 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PSEN1P49768 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PSEN1P49768 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC17.08■□□□□ 0.32
PSEN1P49768 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC17.08■□□□□ 0.32
PSEN1P49768 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC17.08■□□□□ 0.32
PSEN1P49768 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.08■□□□□ 0.32
PSEN1P49768 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC17.08■□□□□ 0.32
PSEN1P49768 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSEN1P49768 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.08■□□□□ 0.32
PSEN1P49768 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms