Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NEDD4P46934 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
NEDD4P46934 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.7■□□□□ 0.58
NEDD4P46934 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.7■□□□□ 0.58
NEDD4P46934 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.7■□□□□ 0.58
NEDD4P46934 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
NEDD4P46934 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.7■□□□□ 0.58
NEDD4P46934 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NEDD4P46934 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 AC009090.5-201ENST00000624886 2285 ntBASIC18.7■□□□□ 0.58
NEDD4P46934 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.7■□□□□ 0.58
NEDD4P46934 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NEDD4P46934 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.7■□□□□ 0.58
NEDD4P46934 SPTLC1P1-201ENST00000447199 261 ntBASIC18.7■□□□□ 0.58
NEDD4P46934 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.7■□□□□ 0.58
NEDD4P46934 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.7■□□□□ 0.58
NEDD4P46934 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.7■□□□□ 0.58
NEDD4P46934 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.7■□□□□ 0.58
NEDD4P46934 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4P46934 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.69■□□□□ 0.58
NEDD4P46934 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NEDD4P46934 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NEDD4P46934 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.69■□□□□ 0.58
NEDD4P46934 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.69■□□□□ 0.58
NEDD4P46934 AC092127.1-201ENST00000567093 3455 ntBASIC18.69■□□□□ 0.58
NEDD4P46934 GNAQP1-201ENST00000444815 1067 ntBASIC18.69■□□□□ 0.58
NEDD4P46934 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.69■□□□□ 0.58
NEDD4P46934 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.69■□□□□ 0.58
NEDD4P46934 AC092337.1-201ENST00000568699 1129 ntBASIC18.69■□□□□ 0.58
NEDD4P46934 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
NEDD4P46934 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
NEDD4P46934 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.69■□□□□ 0.58
NEDD4P46934 LINC02560-201ENST00000596379 459 ntBASIC18.69■□□□□ 0.58
NEDD4P46934 SRD5A3P1-201ENST00000603021 949 ntBASIC18.69■□□□□ 0.58
NEDD4P46934 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
NEDD4P46934 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.69■□□□□ 0.58
NEDD4P46934 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4P46934 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.68■□□□□ 0.58
NEDD4P46934 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEDD4P46934 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEDD4P46934 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.68■□□□□ 0.58
NEDD4P46934 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NEDD4P46934 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.68■□□□□ 0.58
NEDD4P46934 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.68■□□□□ 0.58
NEDD4P46934 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.68■□□□□ 0.58
NEDD4P46934 SLED1-202ENST00000512051 380 ntBASIC18.68■□□□□ 0.58
NEDD4P46934 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.68■□□□□ 0.58
NEDD4P46934 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.68■□□□□ 0.58
NEDD4P46934 AC008761.3-201ENST00000624803 892 ntBASIC18.68■□□□□ 0.58
NEDD4P46934 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.68■□□□□ 0.58
NEDD4P46934 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.68■□□□□ 0.58
NEDD4P46934 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4P46934 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NEDD4P46934 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NEDD4P46934 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms